Class SecondaryAlignmentSkippingIterator

  • Direct Known Subclasses:
    NotPrimarySkippingIterator

    public class SecondaryAlignmentSkippingIterator
    extends Object
    Wrapper around SAMRecord iterator that skips over secondary elements. This iterator conflates a filtering iterator and a peekable iterator. It would be cleaner to handle those concerns separately.
    • Constructor Detail

    • Method Detail

      • hasCurrent

        public boolean hasCurrent()
      • advance

        public boolean advance()